Citation:Khan Z, Bloom JS, Garcia BA, Singh M, Kruglyak L. Protein quantification across hundreds of experimental conditions. Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15544-8. Epub 2009 Aug 26.

Description:Quantitative studies of protein abundance rarely span more than a small number of experimental conditions and replicates. In contrast, quantitative studies of t...

Citation:Brown JN, Kohler JJ, Coberley CR, Sleasman JW, Goodenow MM, 2008 HIV-1 Activates Macrophages Independent of Toll-Like Receptors. PLoS ONE 3(12): e3664. doi:10.1371/journal.pone.0003664

Description:Macrophages provide an interface between innate and adaptive immunity and are important long-lived reservoirs for Human Immunodeficiency Virus Type-1 (HIV-1). M...

Citation:J. Proteome Res., 2009, 8 (10), pp 4860â??4869

Description:High-resolution peptide separation is pivotal for successful shotgun proteomics. The need for capable techniques propels invention and improvement of ever more ...

Citation:J Proteome Res. 2008 Jan;7(1):339-51

Description:Epithelial ovarian cancer is the most lethal gynecological malignancy, and disease-specific biomarkers are urgently needed to improve diagnosis, prognosis, and ...

Citation:Molecular Systems Biology 5:279

Description:Placental abnormalities are associated with two of the most common and serious complications of human pregnancy, maternal preeclampsia (PE) and fetal intrauteri...

Citation:Parker KC, Walsh RJ, Salajegheh M, Amato AA, Krastins B, Sarracino DA, Greenberg SA. J Proteome Res. 2009 May 19. Harvard Partners Center for Genetics and Genomics, Cambridge, MA, Department of Neurology, Brigham and Women's Hospital, Harvard Medical School, and Informatics Program, Children's Hospital Boston, Harvard Medical School, Boston, MA.

Description:We characterized the human muscle proteome by studying muscle biopsy specimens through four different workflows, using 1 or 2D peptide separation, SDS gels, or ...

Citation:Falkner, J. A., Falkner, J. W., Andrews, P. A., ProteomeCommons.org IO Framework: reading and writing multiple proteomics data formats. Bioinformatics 2007 23(2):262-263. PMID: 17121776

Description:Effective use of proteomics data, specifically mass spectrometry data, relies on the ability to read and write the many mass spectrometer file formats. Even wit...

Citation:Parker KC, Walsh R, Salajegheh M, Amato A, Krastins B, Sarracino D, Greenberg SA. J Proteome Res. 2009 Apr 21. [Epub ahead of print] PMID: 19382779

Description:We characterized the human muscle proteome by studying muscle biopsy specimens through four different workflows, using 1 or 2d peptide separation, SDS gels, or ...

Citation:Kuzyk MA, Smith D, Yang J, Cross TJ, Jackson AM, Hardie DB, Anderson NL, Borchers CH. Mol Cell Proteomics. 2009 May 1. [Epub ahead of print]

Description:Mass spectrometry-based multiple reaction monitoring (MRM) quantitation of proteins can dramatically impact the discovery and quantitation of biomarkers via rap...

Citation:Georgianna DR, Hawkridge AM, Muddiman DC, Payne GA. Temperature-dependent regulation of proteins in Aspergillus flavus: whole organism stable isotope labeling by amino acids. J Proteome Res. 2008 Jul;7(7):2973-9.

Description:Stable isotope labeling by amino acids in cell culture (SILAC) has been used in many different organisms including yeast, mammalian cells, and Arabidopsis cell ...